Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808127.1_cds_XP_016495164.1_9507
CDS Infomation

[gene=LOC107814297] [db_xref=GeneID:107814297] [protein=ATP-dependent DNA helicase Q-like 1] [protein_id=XP_016495164.1] [location=complement(join(4546..4656,4795..5019,5380..5733,5811..5925,6261..6304,6395..6491,7146..7309,8453..8713,9117..9499,10019..10214))] [gbkey=CDS]
Sequence

ATGAAAGCGCGGGAAAACCAAGGACGGCCACCGCTGCGACGGCCTCGAAGGGCGGATATT
GGAGACGCCGGAGAAATGCAGGAGCAGGACGACGATCTCGAGTTAGAGAAAGTTCGGTTG
ATAAGCTTAGCTCTTGAATTCGGTTTTGATGAAGACTCCGCAAACACGTGCTTGAATCGC
CTCATTGAACTCTACGGTGATGATGGGCGAGATTTCATCAGTGTGGAACATTGCGGAGAT
GATTTTCTTGCGGCGCTGGCAGAATCAATGCAAGACACTGAGGATTGGGATGATTTGCAA
GCCATTGAATCAGAGGCTTGTGGGGCTCTAGCTGATATGTGGGCTAAGGATGTTCGTGAC
GATTGTAAAGATGAATGTGATGAGGATTCTACGACCTATGTCCATGTTATTGAGGATTCA
CCTCAACAGCACAGGCGTGCAAAAGCAGTGGTGTTGGATTCTTCAAGTGACAGTGAAGAG
ATGGGTATGAAGTGTGCAAGCAAAGAGGATGTTGCTTCTACCTCTAAGATTCGTCTTGAC
AGAAGCCACCAGGGAGGGAGTCGTACCTCAGCGTCAATGGATTATACGAGTGCGGTTACT
GAAGGTTCATTTTCATCAGTCTCCGCTGAAATGGAGTCCTCCTTGGCATCAAATCTTGGG
GATGAAACCCTTAGTTATGAAGAGTTGCAAAGGTTGGATTCTATTGAACTGGCAAATGTG
GTAGTATTTGGAAACAGGTCCTTTCGACCTCTACAACATCAAGCTTGTCAAGCATGTCTT
CAAAAGCGTGATTGTTTTGTTCTTATGCCAACTGGAGGTGGTAAAAGTCTTTGCTACCAG
CTTCCAGCGATCGTACAACCTGGTGTTATGATTGTTGTATCCCCCCTACTTTCCCTAATT
CAAGATCAGATAATCACGCTTAACATCAAGTTTGGGATACCAGCAACATTTTTGAATTCT
CAACAAACTCCCTCACAAGCTGCAGCTGTACTACAAGAATTAAGGAAAGATACACCATCA
TGCAAGCTACTCTATGTAACTCCTGAGAGGATAGCTGGAAATTTGTCATTTCAAGAAACC
TTAAAATGTCTGCATAGAAAGGGACAATTGGCTGGTTTTGTTATTGATGAGGCTCACTGT
GTGAGCCAATGGGGACATGATTTTCGACCAGATTATAGACTACTAGGATGTCTTAAGCAA
AATTTTCCAGATGTTCCGGTGATGGCATTAACTGCCACAGCAACCCACGTAGTCCGTGAA
GATATCTTGAGAGCCTTAAGAATTCCTCATGCCCTTGTCCTTGAGACCAGTTTTGACAGA
TCCAATTTAAAGTATGAAGTAACTGGAAAGAGCAAAGAGCCACTCAAGCAGCTTGGGAAT
CTATTATTGGATCGGTTCAAGAATCTATCTGGAATTGTGTACTGCCTATCCAAAAGTGAG
TGCATGGATGTCTCAAAGTTTTTGAATGAGAAATGCAAAATCAAAACAGCATACTATCAT
GCTGGGTTGGCATCTCGTCAGAGGGTTGCAGTTCAGAAGAGGTGGCGCTCTGGGGAGGTT
GATGTCGTCTGTGCGACTATTGCTTTTGGAATGGGAATTGACAAACCTGATGTTCGGTTC
GTTGTTCACAATACAATGTCCAAATCTATTGAAAGTTATTATCAGGAAGCTGGAAGGGCA
GGAAGAGACAGCCTTCCCGCTACGTGTGTCATATTATACCAAAAGAAGGATTTCAGTAGA
GTTGTGTGCATGCTAAGAAGTGGGCATGGGTATAAAAAAGAAAGCTTGAAGAGGGCCATG
GAACAAGCTCGAAAAATGCAGAGATACTGTGAACTTAAGACTGAATGCCGTAGAAAATTG
TTACTTGAACACTTTGGAGAGCCCTTTGACCAAAATTCCTGCAAGAATGGTTCTAATCCA
TGTGACAACTGTCTCAAGTCTTCCTCGTGA

Peptide Sequence

PEP ID

XP_016495164.1
PEP Infomation

PREDICTED: ATP-dependent DNA helicase Q-like 1 [Nicotiana tabacum]
Sequence

MKARENQGRPPLRRPRRADIGDAGEMQEQDDDLELEKVRLISLALEFGFDEDSANTCLNR
LIELYGDDGRDFISVEHCGDDFLAALAESMQDTEDWDDLQAIESEACGALADMWAKDVRD
DCKDECDEDSTTYVHVIEDSPQQHRRAKAVVLDSSSDSEEMGMKCASKEDVASTSKIRLD
RSHQGGSRTSASMDYTSAVTEGSFSSVSAEMESSLASNLGDETLSYEELQRLDSIELANV
VVFGNRSFRPLQHQACQACLQKRDCFVLMPTGGGKSLCYQLPAIVQPGVMIVVSPLLSLI
QDQIITLNIKFGIPATFLNSQQTPSQAAAVLQELRKDTPSCKLLYVTPERIAGNLSFQET
LKCLHRKGQLAGFVIDEAHCVSQWGHDFRPDYRLLGCLKQNFPDVPVMALTATATHVVRE
DILRALRIPHALVLETSFDRSNLKYEVTGKSKEPLKQLGNLLLDRFKNLSGIVYCLSKSE
CMDVSKFLNEKCKIKTAYYHAGLASRQRVAVQKRWRSGEVDVVCATIAFGMGIDKPDVRF
VVHNTMSKSIESYYQEAGRAGRDSLPATCVILYQKKDFSRVVCMLRSGHGYKKESLKRAM
EQARKMQRYCELKTECRRKLLLEHFGEPFDQNSCKNGSNPCDNCLKSSS

Transcript Sequence

Gene sequence data has not been registered.